Patricia A. Loomis, Ph.D.
The Research
Rosalind Franklin University of Medicine and Science
Splicing regulation of pre-mRNA generated from the deafness-associated Espin gene
The goal of this proposal is to determine how Espin gene expression is controlled at the level of RNA processing. Loss of function mutational analysis will identify RNA sequences on the Espin pre-mRNA that are essential for alternative splicing reactions. Proteins that bind the regulatory RNA sequences will be identified by UV-cross- linking, Western blotting and immunoprecipitation. Correlation of the in vitro analysis with in vivo activity will be accomplished through modulating by RNAi and overexpression the levels of these proteins in HeLa cells transfected with Espin mini-gene constructs containing genomic sequence corresponding to the alternatively spliced exon and flanking introns.